News Archive

EIGC can provide 16S microbiome library prep and sequencing services, including variable regions (V4 or V3/V4).  EICC can provide computational analysis for 16S microbiome data.

Microbiome-Research.PNG

2018-10-04

 

MetaCore trainers will be on campus Tuesday, October 16 for two training sessions at the Health Sciences Library.  MetaCore™ is an integrated knowledge database and software suite for pathway analysis of experimental data and gene lists. The time and agendas for each session are below.  Please register for each session at: https://health.library.emory.edu/training/workshops-classes/index.html.
(search Trumba list for date of event and "METACORE" in the title)

 

LOCATION:   Woodruff Health Sciences Center Library, Room B65   

 

AM SESSION – INTRODUCTION TO METACORE

Introductory on-boarding session for new users for basic functionality session

9:00 AM – 9:30 AM

Introduction to Clarivate Analytics

9:30 AM – 10:00 AM

Knowledge Mining – Exploring & Exporting the MetaCore Database

10: 00 AM – 10:30 AM

Uploading, Filtering and Setting a Background

10:30 AM – 11:15 AM

Running Functional Enrichments and Exploring Pathway Maps

11:15 AM – 12:00 PM

Running Workflows

Q&A

  •  PM SESSION – ADVANCEMENTS & ENHANCEMENTS FOR EXPERIENCED METACORE USERS

Intermediate refresher training highlighting new content additions and product functionalities

 

1:00 PM – 1:15 PM

Re-Introducing Clarivate Analytics

 

Key Pathway Advisor
Hypothesizing key hubs using the causal reasoning algorithm

Choose your adventure!
Topics covered depend upon survey results

1:15 PM – 3:30 PM

Finding Key Hubs using Over-Connectivity Analysis

Using the Microarray repository for gene comparisons against public data

Building Networks with MetaCore

Constructing your own pathway maps

NEW! Performing toxicogenomic analysis in MetaCore

Analyzing and building networks with miRNA and mRNA data

Analyzing multi-omics data (RNA-seq, proteomics, metabolomics, etc.)

3:30 – 4:00 PM

Q&A

 


LabKey is a research informatics platform provided by EICC and LITS that allows researchers to store, integrate and showcase their data in a powerful, user-friendly fashion. LabKey Server takes in different varieties of data, integrates and transforms into reports and insights, and presents them to different audiences.

labkeyimg

December 12, 2017

AWS event


May 26, 2017

NIH Funding for Cloud Computing

If your research is funded by NIH, you are eligible for a new pilot which funds cloud resources., By participating, you may help shape the future of the NIH grants model. Emory has partnered with NIH and the Center to Modernize Healthcare (CAMH) to spread awareness about a novel funding mechanism. The NIH Commons Credits Model is a time- and cost-efficient way for NIH-funded biomedical investigators to gain cloud computing support for their current research as well as pave the way toward better accessibility, interoperability, and reuse of digital objects for future research. This is not a grant; this funding is recommended to supplement current NIH grants or to jump start a related grant in the biomedical space. The application is just two pages, and funds will be distributed within a few months of the closing of each cycle. The next cycle is scheduled to open this summer and dollar-denominated cloud-credits will be distributed in the fall. We encourage interested investigators to register now on the NIH Commons Credits portal to receive up-to-date information and begin your application. For ease, this instructional video will show you how.


April 12, 2017

BBISR "Do It Yourself" Workshops

BBISR Summer 2017 Workshop Series


April 6, 2017

BIOS 560R Fall 2017

BIOS560R Fall 2017 Flyer

April 5, 2017

Systems Biology and Bioinformatics Interest Group

Whitehead BRB, Rm. 200. Lunch will be provided

Program:

  • Yunfeng Huang (RSPH): Joint Metabolomic and Epigenomic Study of Cigarette Smoking
  • Andrei Todor, Shuzhao Li (SOM): "Kokako, hippo, shark... how Jupyter helps manage our zoo" Jupyter notebook is a useful tool for data analysis. Here's an intro and a Youtube tutorial

February 23, 2017 

 

 

Major Equipment and Facilities and Resources documents were updated for the Emory Integrated Computational Core


November 17, 2015

EICC Holiday Schedule

The EICC will be closed for Thanksgiving on 11/24 and 11/25, and during the Christmas break on the following dates: 12/23, 12/26, 12/30, and 1/2. Happy Holidays!