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  1. Paz E, et al., Biochemical and neurophysiological effects of deficiency of the mitochondrial import protein TIMM50. Elife. 2024:13:RP99914. (Bagchi P & Seyfried NT are co-authors)
  2. Makkaoui N, et al., Cell-based therapies reverse the heart failure-altered right ventricular proteome towards a pre-disease state. Stem Cell Res Ther. 2024;15(1):420. (Bagchi P is a co-author)
  3. Sahu S, et al., Copper(I)-nitrene platform for chemoproteomic profiling of methionine. Nat Commun. 2024;15(1):4243. (Bagchi P is a co-author)
  4. DiCandia MA, et al., A conserved switch controls virulence, sporulation, and motility in C. difficile. PLoS Pathog. 2024;20(5):e1012224. (Bagchi P is a co-author)
  5. Scorr LM, et al., Exploration of potential immune mechanisms in cervical dystonia. Parkinsonism Relat Disord. 2024:122:106036. (Bagchi P is a co-author)
  6. Wang E, et al., Proteomic Signaling of Dual-Specificity Phosphatase 4 (DUSP4) in Alzheimer's Disease. Biomolecules. 2024;14(1):66 (Bagchi P & Seyfried NT are co-authors)
  7. Han Y, et al., Regulation of the intestinal Na+/H+ exchanger NHE3 by AMP-activated kinase is dependent on phosphorylation of NHE3 at S555 and S563. Am J Physiol Cell Physiol. 2024;326(1):C50-C59 (Bagchi P is a co-author).

  1. Parra-Rivas LA, et al., Serine-129 phosphorylation of α-synuclein is an activity-dependent trigger for physiologic protein-protein interactions and synaptic function. Neuron. 2023;111(24):4006-4023.e10. (Bagchi P is a co-author)
  2. Head PE, et al., DNA-PK is activated by SIRT2 deacetylation to promote DNA double-strand break repair by non-homologous end joining. Nucleic Acids Res. 2023;51(15):7972-7987. (Duong DM & Seyfried NT are co-authors)
  3. Zhao J, et al., Defining the ligand-dependent proximatome of the sigma 1 receptor. Front Cell Dev Biol. 2023:11:1045759. (Bagchi P is a co-author)
  4. Geitgey DK, et al., The 'omics of obesity in B-cell acute lymphoblastic leukemia. J Natl Cancer Inst Monogr. 2023;2023(61):12-29 (Bagchi P is a co-author)

  1. Kapoor-Vazirani P, et al., SAMHD1 deacetylation by SIRT1 promotes DNA end resection by facilitating DNA binding at double-strand breaks. Nat Commun. 2022;13(1):6707. (Duong DM & Seyfried NT are co-authors)
  2. Johnson MA, et al., Proximity-based labeling reveals DNA damage-induced phosphorylation of fused in sarcoma (FUS) causes distinct changes in the FUS protein interactome. J Biol Chem. 2022;102135. (Bagchi P & Seyfried NT are co-authors)
  3. Zhang H, et al., Quantitative proteomic analysis of the lysine acetylome reveals diverse SIRT2 substrates. Sci Rep. 2022;12(1):3822. (Duong DM & Seyfried NT are co-authors)
  4. Prasad V, et al., Loss of cardiac myosin light chain kinase contributes to contractile dysfunction in right ventricular pressure overload. Physiol Rep. 2022;10(7):e15238 (Bagchi P is a co-author)
  5. Williams D, et al., Stable flow-induced expression of KLK10 inhibits endothelial inflammation and atherosclerosis. Elife. 2022;11:e72579 (Bagchi P is a co-author).

  1. Wang Y, et al., Orthogonal ubiquitin transfer reveals human papillomavirus E6 downregulates nuclear transport to disarm interferon-γ dependent apoptosis of cervical cancer cells. FASEB J., 2021;35(11):e21986. (Duong DM & Seyfried NT are co-authors)
  2. Gorkhali R, et al., Extracellular calcium alters calcium-sensing receptor network integrating intracellular calcium-signaling and related key pathway. Sci Rep. 2021;11(1):20576. (Bagchi P, Duong DM, & Seyfried NT are co-authors)
  3. Briscione MA, et al., Differential expression of striatal proteins in a mouse model of DOPA-responsive dystonia reveals shared mechanisms among dystonic disorders. Mol Genet Metab., 2021;133(4):352-361 (Bagchi P is a co-author)
  4. Corgiat EB, et al., The RNA-binding protein Nab2 regulates the proteome of the developing Drosophila brain. J Biol Chem. 2021 Jul;297(1):100877. (Seyfried NT & Duong DM are co-authors)
  5. Lagomarsino VN, et al., Stem cell-derived neurons reflect features of protein networks, neuropathology, and cognitive outcome of their aged human donors. Neuron, 2021;S0896-6273(21)00578-X. (Seyfried NT & Duong DM are co-authors)
  6. Peoples JN, et al., Loss of the mitochondrial phosphate carrier SLC25A3 induces remodeling of the cardiac mitochondrial protein acylome. Am J Physiol Cell Physiol, 2021. (Seyfried NT & Duong DM are co-authors)
  7. Sutcliffe DJ, et al., Induced pluripotent stem cells from subjects with Lesch-Nyhan disease. Scientific Reports, 2021;11:8523.
  8. Aumann WK, et al., Fusion of the CRM1 nuclear export receptor to AF10 causes leukemia and transcriptional activation of HOXA genes. Leukemia,2021;35(3):876-880. (Pritha Bagchi, PhD and the Emory Integrated Proteomics Core provided assistance with BioID2 Mass Spectrometry.)

  1. Chang YH, et al., Proteomic Analysis of Human Immune Responses to Live-Attenuated Tularemia Vaccine. Vaccines (Basel), 2020;8(3):413. (Seyfried NT & Duong DM are co-authors)
  2. Huang M, et al., Network analysis of the progranulin-deficient mouse brain proteome reveals pathogenic mechanisms shared in human frontotemporal dementia caused by GRN mutations. Acta Neuropathol Commun, 2020;8:163. (Seyfried NT & Duong DM are co-authors)
  3. Koyen AE, et al., EZH2 has a non-catalytic and PRC2-indepndent role in stabilizing DDB2 to promote nucleotide excision repair. Oncogene. 2020;39:4798-813. (Seyfried NT & Duong DM are co-authors)
  4. Nguyen TT, et al., Quantitative Proteomics Reveal an Altered Pattern of Protein Expression in Brain Tissue from Mice Lacking GPR37 and GPR37L1. J Proteome Res. 2020;19:744-55. (Seyfried NT & Duong DM are co-authors)

  1. Chen G, et al., Acetylation regulates ribonucleotide reductase activity and cancer cell growth. Nat Commun. 2019;10:3213. (Duong DM is a co-author)
  2. Cho JJ, et al., Hectd3 promotes pathogenic Th17 lineage through Stat3 activation and Malt1 signaling in neuroinflammation. Nat Commun. 2019;10:701. (Duong DM is a co-author)
  3. Gerber KJ, et al., Specific Proteomes of Hippocampal Regions CA2 and CA1 Reveal Proteins Linked to the Unique Physiology of Area CA2. J Proteome Res. 2019;18:2571-84. (Seyfried NT & Duong DM are co-authors)
  4. Prezioso SM, et al., Trimethylation of Elongation Factor-Tu by the Dual Thermoregulated Methyltransferase EftM Does Not Impact Its Canonical Function in Translation. Sci Rep. 2019;9:3553. (Duong DM is a co-author)
  5. Werner E, et al., Ionizing Radiation induction of cholesterol biosynthesis in Lung tissue. Sci Rep. 2019;9:12546. (Seyfried NT & Duong DM are co-authors)

  1. Qadota H, et al., Protein phosphatase 2A is crucial for sarcomere organization in Caenorhabditis elegans striated muscle. Mol Biol Cell. 2018;29:2084-97. (Bagchi P is a co-author)
  2. Angeles-Han ST, et al., Discovery of tear biomarkers in children with chronic non-infectious anterior uveitis: a pilot study. J Ophthalmic Inflamm Infect. 2018;8:17. (Duong DM is a co-author)  
  3. Chou CC, et al., TDP-43 pathology disrupts nuclear pore complexes and nucleocytoplasmic transport in ALS/FTD. Nat Neurosci. 2018;21:228-39. (Seyfried NT & Duong DM are co-authors)
  4. Evans PR, et al., Interactome Analysis Reveals Regulator of G Protein Signaling 14 (RGS14) is a Novel Calcium/Calmodulin (Ca(2+)/CaM) and CaM Kinase II (CaMKII) Binding Partner. J Proteome Res. 2018;17:1700-11. (Seyfried NT & Duong DM are co-authors)

  1. Wang Y, et al., Identifying the ubiquitination targets of E6AP by orthogonal ubiquitin transfer. Nat Commun. 2017;8:2232. (Duong DM is a co-author)